ConnectoViz: Circular Connectome Visualization#

Overview#

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A robust and customizable Python package for visualizing circular connectomes.

Features#

This package provides a comprehensive set of tools for visualizing circular connectomes. It receives a connectome matrix and generates a circular plot, allowing for detailed exploration of connectivity patterns.

  • The connectome can be based on the following, widely used atlases: fan2016, huang2022, schaefer2018 and schaefer2018tian2020.

  • You can group the nodes as you wish, according to metadata (gray matter volume, cortex syntax, etc.), as long as you have a mapping of the nodes to the groups.

  • The connectome can be filtered by a threshold, which is set to 0.1 by default.

  • You can choose your favorite color palette

Credits#

This package was created with Cookiecutter and the audreyr/cookiecutter-pypackage project template.